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authorAndreas Sandberg <andreas.sandberg@arm.com>2017-02-27 13:17:51 +0000
committerAndreas Sandberg <andreas.sandberg@arm.com>2017-05-02 12:37:32 +0000
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Change-Id: I52e4fc9ebf2f59da57d8cf8f3e37cc79598c2f5f Signed-off-by: Andreas Sandberg <andreas.sandberg@arm.com> Reviewed-by: Andreas Hansson <andreas.hansson@arm.com> Reviewed-by: Curtis Dunham <curtis.dunham@arm.com> Reviewed-on: https://gem5-review.googlesource.com/2229 Reviewed-by: Tony Gutierrez <anthony.gutierrez@amd.com> Reviewed-by: Jason Lowe-Power <jason@lowepower.com> Reviewed-by: Pierre-Yves PĂ©neau <pierre-yves.peneau@lirmm.fr>
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+Eigen
+=====
+
+`Eigen <http://eigen.tuxfamily.org>`_ is C++ header-based library for dense and
+sparse linear algebra. Due to its popularity and widespread adoption, pybind11
+provides transparent conversion support between Eigen and Scientific Python linear
+algebra data types.
+
+Specifically, when including the optional header file :file:`pybind11/eigen.h`,
+pybind11 will automatically and transparently convert
+
+1. Static and dynamic Eigen dense vectors and matrices to instances of
+ ``numpy.ndarray`` (and vice versa).
+
+2. Returned matrix expressions such as blocks (including columns or rows) and
+ diagonals will be converted to ``numpy.ndarray`` of the expression
+ values.
+
+3. Returned matrix-like objects such as Eigen::DiagonalMatrix or
+ Eigen::SelfAdjointView will be converted to ``numpy.ndarray`` containing the
+ expressed value.
+
+4. Eigen sparse vectors and matrices to instances of
+ ``scipy.sparse.csr_matrix``/``scipy.sparse.csc_matrix`` (and vice versa).
+
+This makes it possible to bind most kinds of functions that rely on these types.
+One major caveat are functions that take Eigen matrices *by reference* and modify
+them somehow, in which case the information won't be propagated to the caller.
+
+.. code-block:: cpp
+
+ /* The Python bindings of these functions won't replicate
+ the intended effect of modifying the function arguments */
+ void scale_by_2(Eigen::Vector3f &v) {
+ v *= 2;
+ }
+ void scale_by_2(Eigen::Ref<Eigen::MatrixXd> &v) {
+ v *= 2;
+ }
+
+To see why this is, refer to the section on :ref:`opaque` (although that
+section specifically covers STL data types, the underlying issue is the same).
+The :ref:`numpy` sections discuss an efficient alternative for exposing the
+underlying native Eigen types as opaque objects in a way that still integrates
+with NumPy and SciPy.
+
+.. seealso::
+
+ The file :file:`tests/test_eigen.cpp` contains a complete example that
+ shows how to pass Eigen sparse and dense data types in more detail.