Totally re-work the way that jobfiles are done so there is more

information that can be used for other aspects of sending jobs.
New graphing output stuff with matplotlib.

util/pbs/job.py:
    Shuffle code around and create the JobDir class which encapsulates
    all of the functionality needed for making, organizing, and cleaning
    a job directory.
    Better status output
util/pbs/jobfile.py:
    Majory re-working of the jobfile code.
    A job file now consists of several objects that describe how
    jobs should be run, it includes information about checkpoints,
    and graphing.
util/pbs/send.py:
    use the new jobfile code.
    deal with the 15 character limit of pbs by truncating the name and
    using the raj hack.
util/stats/db.py:
    fix the __str__ function for nodes
    provide __getitem__ for the Database class
util/stats/stats.py:
    use the jobfile stuff to figure out what the proper naming
    and organziation of the graphs should be.
    move all output code to output.py, get rid of ploticus and use
    matplotlib

--HG--
rename : util/categories.py => util/stats/categories.py
extra : convert_revision : 0d793cbf6ad9492290e8ec875ce001c84095e1f7

1 files changed, 146 insertions, 0 deletions

diff --git a/util/stats/profile.py b/util/stats/profile.py
new file mode 100644
index 000000000..65a03e9aa
--- /dev/null
+++ b/util/stats/profile.py
@@ -0,0 +1,146 @@
+# Copyright (c) 2005 The Regents of The University of Michigan
+# All rights reserved.
+#
+# Redistribution and use in source and binary forms, with or without
+# modification, are permitted provided that the following conditions are
+# met: redistributions of source code must retain the above copyright
+# notice, this list of conditions and the following disclaimer;
+# redistributions in binary form must reproduce the above copyright
+# notice, this list of conditions and the following disclaimer in the
+# documentation and/or other materials provided with the distribution;
+# neither the name of the copyright holders nor the names of its
+# contributors may be used to endorse or promote products derived from
+# this software without specific prior written permission.
+#
+# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
+# "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
+# LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
+# A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
+# OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
+# LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
+# DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
+# THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
+# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+# OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+from orderdict import orderdict
+import output
+
+class ProfileData(object):
+    def __init__(self):
+        self.data = {}
+        self.total = {}
+        self.runs = orderdict()
+        self.runlist = []
+
+    def addvalue(self, run, cpu, symbol, value):
+        value = float(value)
+        self.data[run, cpu, symbol] = self.getvalue(run, cpu, symbol) + value
+        self.total[run, cpu] = self.gettotal(run, cpu) + value
+        if run not in self.runs:
+            self.runs[run] = orderdict()
+
+        if cpu not in self.runs[run]:
+            self.runs[run][cpu] = {}
+
+        if symbol not in self.runs[run][cpu]:
+            self.runs[run][cpu][symbol] = 0
+
+        self.runs[run][cpu][symbol] += value
+
+    def getvalue(self, run, cpu, symbol):
+        return self.data.get((run, cpu, symbol), 0)
+
+    def gettotal(self, run, cpu):
+        return self.total.get((run, cpu), 0)
+
+class Profile(object):
+    default_order = ['ste', 'hte', 'htd', 'ocm', 'occ', 'ocp']
+
+    # This list controls the order of values in stacked bar data output
+    default_categories = [ 'interrupt',
+                           'driver',
+                           'stack',
+                           'bufmgt',
+                           'copy',
+                           'user',
+                           'other',
+                           'idle']
+
+    def __init__(self, run_order=[], categories=[], stacknames=[]):
+        if not run_order:
+            run_order = Profile.default_order
+        if not categories:
+            categories = Profile.default_categories
+
+        self.run_order = run_order
+        self.categories = categories
+        self.rcategories = []
+        self.rcategories.extend(categories)
+        self.rcategories.reverse()
+        self.stacknames = stacknames
+        self.prof = ProfileData()
+        self.categorize = True
+        self.showidle = True
+        self.maxsymlen = 0
+
+    def category(self, symbol):
+        from categories import categories, categories_re
+        if categories.has_key(symbol):
+            return categories[symbol]
+        for regexp, cat in categories_re:
+            if regexp.match(symbol):
+                return cat
+        return 'other'
+
+    # Parse input file and put the results in the given run and cpu
+    def parsefile(self, run, cpu, filename):
+        fd = file(filename)
+
+        for line in fd:
+            (symbol, count) = line.split()
+            if symbol == "0x0":
+                continue
+            count = int(count)
+
+            if self.categorize:
+                symbol = self.category(symbol)
+                if symbol == 'idle' and not self.showidle:
+                    continue
+
+                if symbol not in self.categories:
+                    symbol = 'other'
+
+            self.maxsymlen = max(self.maxsymlen, len(symbol))
+            self.prof.addvalue(run, cpu, symbol, count)
+
+        fd.close()
+
+    # Read in files
+    def inputdir(self, directory):
+        import os, os.path, re
+        from os.path import expanduser, join as joinpath
+
+        directory = expanduser(directory)
+        label_ex = re.compile(r'm5prof\.(.*)')
+        for root,dirs,files in os.walk(directory):
+            for name in files:
+                match = label_ex.match(name)
+                if not match:
+                    continue
+
+                filename = joinpath(root, name)
+                prefix = os.path.commonprefix([root, directory])
+                dirname = root[len(prefix)+1:]
+                self.parsefile(dirname, match.group(1), filename)
+
+    def get(self, job, stat):
+        if job.system is None:
+            raise AttributeError, 'The job must have a system set'
+
+        cpu =  '%s.full0' % job.system
+        values = []
+        for cat in self.categories:
+            values.append(self.prof.getvalue(job.name, cpu, cat))
+        return values